The “One Touch Pipeline” is a comprehensive framework for NGS project organization and processing. The application provides support in all steps of this process, including data transfer from temporary to final storage, execution of data quality monitoring programs, alignment of reads to the reference genome and variant calling. It allows full automatization, extended project administration, and full processing control for operators.
Homepage
https://gitlab.com/one-touch-pipeline/otp
Documentation
https://one-touch-pipeline.gitlab.io/otp/
Contact
OTP developer team (dmg-service (at) dkfz-heidelberg (dot) de)
Jürgen Eils (j.eils (at) dkfz (dot) de)